16 X-chromosome STR loci frequency data from a German population

Allele frequencies for 16 X-linked STRs, suitable for forensic purposes, were obtained from a sample of unrelated German individuals (male and female). The presented data show also repeat sequence structures and statistic parameters describing there information content.     

A collaborative genetic study on the STR system FGA in two Austrian population samples

Population genetic data of the short tandem repeat system FGA were determined by PCR analysis in two Austrian population samples, one population north of the Alps and one population south of the Alps. A total of 15 different alleles could be observed in 500 unrelated individuals. No significant differences were found between the phenotype frequencies in the two populations, as determined by R×C contingency test, so the populations could be pooled for further analysis. Both the single populations and the pooled population are in accordance with Hardy–Weinberg equilibrium. FGA proves to be very efficient for both stain analysis and paternity testing. The presented allele and genotype data allow the statistical interpretation of this system for Austrians.     

浙江汉族人群5个Y-STR基因座的遗传多态性调查

目的　完善浙江省汉族人群Y STR基因座遗传多态性的频率调查 ,为法医学应用提供基础数据。方法　应用Y PLEXTM5荧光标记复合扩增系统 ,对浙江汉族 2 0 0名无关男性个体进行 5个STR基因座的复合扩增 ,用ABI310 0型基因分析仪对扩增产物进行检测 ,统计 5个Y STR基因座的群体遗传学参数。　结果DYS389Ⅰ、DYS389Ⅱ、DYS4 39、DYS4 38和DYS392基因座分别检出 4、7、5、4、6个等位基因 ,其GD值分别为0 5 86 8、0 7779、0 6 734、0 5 0 6 2和 0 6 32 8。观察到 5个Y STR基因座共同构成的单倍型 95种 ,其中有 5 4种单倍型只出现 1次 ,15种出现 2次 ,12种出现 3次 ,5种出现 4次 ,4种出现 5次 ,1种出现 6次 ,1种出现 7次 ,2种出现 8次 ,1种出现 11次 ,累计GD值为 0 992 0。结论　 5个Y STR基因座多态性分布较好 ,适合浙江法庭科学应用。     

Allele distribution of three X-chromosome STR loci in an antioquian population sample

The X-linked short tandem repeats (STR) markers have proven to be very useful tools for paternity testing when the disputed child is female. The aim of this study was to describe the polymorphism of three X-chromosomal STR loci (DXS6797, DXS6800 and HPRTB) in an Antioquian (Colombian) population sample. PCR products were separated in 4% acrylamide-bis-acrylamide denaturing gels followed by silver staining. Allele size determination and genotyping were performed according to recommendations of the DNA Commission of the International Society of Forensic Genetic using the allelic ladder manufactured at home and based on DNA controls including K562 and 9947A (Promega). Gene frequencies were calculated using ARLEQUIN version 3.11. Population genetic data were obtained by analyzing 127-400 unrelated males and 135 unrelated females from Antioquian (Colombian) population. Distribution of the allele frequencies of these systems for Antioquia population is similar to the European populations.     

Patterns of genetic polymorphism at the 10 X-chromosome STR loci in Mongol population

Genetic diversity at 10 X-chromosome STR loci has been approved and widely used for forensic science field. In this paper, we have studied this genetic diversity in various Mongol ethnic group with geographic backgrounds. Allele frequencies of 10 X-chromosome STR loci, including DXS7133, DXS6799, DXS8378, DXS7423, DXS6804, HPRTB, DXS7424, DXS7132, DXS6789 and DXS101, were obtained from healthy unrelated individuals (53 females and 47 males) of Mongol ethnic group lived in north China. Gene diversity analysis showed that the average heterozygosity was uniformly high (0.687) in the studied population. The coefficient of PIC was 0.99998.     

Population data for 8 X-chromosome STR loci in a population sample from Northern Italy and from the Sardinia island

To establish a database for DXS8378, HPRTB, DXS7423, DXS7132, DXS10134, DXS10074, DXS10101, DXS10135 loci in an Italian population sample from Brescia (Northern Italy) and from the Sardinia island, 131 unrelated individuals were typed. DNA was amplified in a multiplex reaction with subsequent automatic detection using capillary electrophoresis. The obtained data give a contribution to the definition of Italian population STR allele frequencies for the eight analysed loci.     

A Peruvian population study of eight Y-chromosome STR loci

We have analyzed the distribution of the allele frequencies and haplotypes at eight Y-chromosomal short tandem repeat (STR) loci (DYS437, DYS438, DYS439, DYS460, DYS461, GATA A10, GATA C4 and GATA H4) in a sample population of 87 unrelated individuals from Perú.     

A Spanish population study of 17 Y-chromosome STR loci

Haplotype, allele frequencies and population data of 17 Y-chromosome STR loci DYS19, DYS385, DYS389I, DYS389II, DYS390, DYS391, DYS392, DYS393, DYS437, DYS438, DYS439, DYS460 (GATA A7.1), DYS461 (GATA A7.2), GATA A10, GATA C4 and GATA H4 were determined from a sample of 148 unrelated male individuals from Spain. A total of 144 haplotypes were identified by the 17 Y-STR markers, of which 141 were unique, two were found in two individuals and one was found in three individuals. The haplotype diversity (99.95%) and discrimination capacity (97.30%) were calculated. Comparisons were made with previously published haplotype data on other Iberian population samples and no significant differences were found.     

19个常染色体与4个Y染色体STR复合扩增体系的建立

目的建立19个常染色体STR及Amelogenin和4个Y染色体STR基因座复合扩增体系,并对其效能进行评估。方法用五色荧光标记20＋4Y—STR基因座,建立同步扩增检测体系,用ABI3130XL遗传分析仪对扩增产物进行电泳,GeneMapperID3．2软件进行基因分型;检测体系的灵敏度、均衡性、稳定性、特异性、同一性和稳定性,并观察混合、降解及微量检材的分型情况。结果采用本文体系,DNA模板量在0．05～1．00ng时,分型准确,均衡性、特异性好;混合、降解及微量检材分型正确。该19个常染色体STR基因座的累计个人识别率大于0．999999999,三联体累计非父排除率达0．999999985,Y—STR单倍型多态性为0．592。结论本文建立的复合扩增体系分型准确,稳定,在法医学案件检验及数据库建设等方面有良好的应用前景。     

12个mini-X-STR和Amel基因座荧光标记复合扩增体系的初步研究

目的研究建立12个mini-X-STR和Amel基因座复合扩增体系。方法选择DXS101、DXS10159、DXS10162、DXS10164、DXS6789、DXS7133、DXS7423、DXS7424、DXS8378、DXS981、GATA165B12和GA-TA31E08共12个X-STR与Amelogenin基因座,自行设计引物,分别采用FAM、HEX、Tamra、ROX四色荧光标记5′端,并进行必要的修饰,按照合适的引物浓度进行混合。对97个血痕样本进行复合扩增,并用ABI3130XL进行电泳和分型。结果所建立的荧光标记复合扩增体系能够得到清晰、明确的分型图谱,灵敏度达50pg,稳定性、重复性与平衡性较佳。结论本研究建立的12个mini-X-STR和Amel基因座荧光标记复合扩增体系统检验方法简单,灵敏度高,适合实际办案的需要。     

中国鄂伦春族人群15个STR基因座多态性研究

目的　调查 15个STR基因座在中国鄂伦春族人群中的基因频率分布。方法　应用四色荧光标记引物复合扩增技术 ,对鄂伦春族 10 1名无关个体的血样 15个STR基因座进行分型研究 ,计算各基因座的相关群体遗传学参数。结果　在 10 1名鄂伦春族人群中 15个STR基因座偶合率在 0 .0 0 94～ 0 .345 3之间 ,个体识别概率 (DP)在 0 .6 5 47～ 0 .990 6之间 ,杂合度在 0 .6 436～ 0 .910 9之间 ,三联非父排除率 (PE)在 0 .30 2 2～ 0 .8388之间 ,多态性信息总量 (PIC)在 0 .4 992～ 0 .914 6之间 ,15个STR基因座总TDP值为 0 .9999999999998,所有基因座经 χ2 检验符合Hard—Weinberg平衡。结论　所检测的 15个STR基因座在鄂伦春族人群中等位基因分布较好 ,个体识别率高 ,适合法医个体识别和亲子鉴定     

中国东部蒙古族人群15个STR基因座多态性研究

目的调查15个STR基因座在中国东部蒙古族人群中的基因频率分布。方法应用四色荧光标记引物复合扩增技术,对105名东部蒙古族无关个的血样15个STR基因座进行多态性研究。结果在东部蒙古族人群中15个STR基因座偶合率在0.0084～0.2169之间,个体识别概率(DP)在0.7831～0.9916之间,杂合度在0.5619～0.9231之间,三联非父排除率(PE)在0.4490～0.8444之间,多态性信息总量(PIC)在0.5438～0.9178之间,15个STR基因座总TDP值为0.9999999999998,所有基因座经χ2检验符合Hard-Weinberg平衡。结论上述15个STR基因座在东部蒙古族人群中等位基因分布较好,个体识别率高,适合法医个体识别和亲子鉴定。     

中国鄂温克族人群15个STR基因座多态性研究

目的调查15个STR基因座在中国鄂温克族人群中的基因频率分布。方法应用PowerPlex16System复合扩增系统,对99名鄂温克族无关个的血样DNA进行多态性研究。结果在鄂温克族人群中15个STR基因座偶合率(Pm)在0.0205～0.1733之间,个体识别概率(DP)在0.8267～0.9795之间,杂合度在0.6061～0.9091之间,三联非父排除率(PE)在0.4038～0.7690之间,多态性信息总量(PIC)在0.5985～0.8734之间,15个STR基因座总TDP值为0.9999999999998,所有基因座经χ2检验符合Hard-Weinberg平衡。结论上述15个STR基因座在鄂温克族人群中等位基因分布较好,个体识别率高,适合法医个体识别和亲子鉴定。     

Development of a 24-plex Y chromosomal STR loci typing system

Y-chromosomal short tandem repeat (Y-STR) loci can play important roles in forensic casework and paternity testing. In our paper, 24-plex Y-STR typing system, which includes 3 loci (DYS635 and DYS385a/b) existed in current widely available commercial kits and 21 additional loci (DYS531, DYS630, DYS622, DYS552, DYS510, DYS449, DYS459a/b, DYS446, DYS443, DYS587, DYS527a/b, DYS460, Y-GATA-A10, DYS520, DYS557, DYS522, DYS481, DYS570, DYS444) was established with 5-dye fluorescence labeling. 200 unrelated Chinese Han males were successfully genotyped with the system and 198 haplotypes were observed. The gene diversity of each locus ranged from 0.55 (DYS531) to 0.96 (DYS385a/b), the haplotype of diversity was 0.9998 for these 24 Y-STR loci. The established 24-plex Y-STR typing system is proved to be stable and efficient in forensic DNA typing.     

Allele frequencies for 10 STR loci in a population from central Poland

Allele frequencies of 10 STR loci included in the AmpFlSTR SGM Plus Kit (PE Applied Biosystem) was obtained a simple of 222 unrelated individuals residing in Warsaw (Poland) region.     

浙江畲族人群9个STR基因座的遗传多态性

目的调查浙江畲族人群STR基因座的遗传多态性,为群体遗传学和法医学个人识别、亲子鉴定提供基础数据。方法采用AmpFlSTRProfilerPlus试剂盒(ABI公司),ABI310基因自动分析仪对浙江畲族120名无关个体血样的D3S1358、VWA、FGA、D8S1179、D21S11、D18S51、D5S818、D13S317和D7S820等9个STR基因座进行等位基因频率和基因型频率调查。结果获得浙江畲族人群9个STR基因座的基因频率分布资料,所有基因座基因型频率分布均符合Hardy—Weinberg平衡,计算得杂合度(H)0.655～0.960,个人识别率(DP)0.878～0.960,非父排除率(PE)0.363～0.677,多态信息总量(PIC)0.68～0.86。结论该9个STR基因座在浙江畲族人群中呈高度多态性,在法医学及人类遗传学研究中具有重要意义。     

Allele frequencies for nine PCR-typed STR loci in a population from middle China

Allele frequencies for nine STR loci namely, CSF1PO, D5S818, D8S1179, F13A01, F13B, TPOX, HUMvWA, HUMFGA and D3S1358 were obtained from a Chinese Han population from Henan province (middle China).