Effect of blood stained soils and time period on DNA and allele drop out using Promega 16 Powerplex kit |
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Authors: | M.S. Shahzad Ozlem Bulbul Gonul Filoglu Mujgan Cengiz Salih Cengiz |
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Affiliation: | aInstitute of Forensic Science, Istanbul University, Turkey;bDepartment of Medical Biology, Istanbul University, Turkey |
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Abstract: | Blood stained soils may be of great interest in forensic incidents. Amplification of DNA from soil is often inhibited by co-purified contaminants. Different soils types from Pakistan and Turkey were stained with blood and samples were collected systematically after specified intervals. Rapid, inexpensive, large-scale DNA extraction method involving minimal purification was developed. DNA was quantized using Spectrophotometer and Fluorometer and was confirmed by Agarose Gel Electrophoresis. DNA extracted from different soils in different periods showed a remarkable decrease in yield as well as degradation in every extraction. PCR amplification was performed using various DNA targets present in Promega 16 Powerplex® System kit. Amplification could not carry out in all loci especially in degraded samples taken after 20 days. Allele n locus drop out was noticed which shows that DNA was degraded. For some loci more than 2 alleles were also noticed showing contamination while working with the blood stained soils. |
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Keywords: | Blood stained soils Contamination Degradation Promega 16 Powerplex® kit Allele drop out |
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