The NucleoSpin DNA Clean-up XS kit for the concentration and purification of genomic DNA extracts: An alternative to microdialysis filtration |
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Authors: | William R Hudlow Robert Krieger Markus Meusel Joshua C Sehhat Mark D Timken Martin R Buoncristiani |
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Institution: | a California Department of Justice Jan Bashinski DNA Laboratory, 1001 W. Cutting Blvd., Suite 110, Richmond, CA 94804, USA;b MACHEREY-NAGEL GmbH & Co. KG, Neumann-Neander-Str. 6.8, 52355 Dueren, Germany |
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Abstract: | Traditionally, DNA extracts from biological evidence items have been concentrated and rinsed using microdialysis filtration units, including the Centricon® and Microcon® centrifugal filter devices. As an alternative to microdialysis filtration, we present an optimized method for using NucleoSpin® XS silica columns to concentrate and clean-up aqueous extracts from the organic extraction of DNA from biological samples. The method can be used with standard organic extraction and dithiothreitol (DTT)-based differential extraction methods with no modifications to these methods prior to the concentration and clean-up step. Extracts from laboratory-prepared bloodstains, saliva and semen stains have been successfully amplified with both qPCR and STR assays. Finally, the total time to process a set of samples with the NucleoSpin® XS column is approximately 30 min vs. approximately 1.5 h with the Centricon® YM-100 filter device. |
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Keywords: | DNA DNA extraction PCR inhibitor Forensic |
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